Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNFFKKIVNKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPK--------QLEVALLRFVRGESYYD---KTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLW-GEKLN--VQVISA-KEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ |
| 1ZU4 Chain:A ((16-305)) | -FNFSKDI----KKLSKKYKQADDEFFEELEDVLI----QTDMGMKMVLKVSNLVRKKTKRDTSFENIKDALVESLY-QAYTDNDW-YRIDFKENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQNKTNLMAELEKMNKIIQQVEKSAPHEVLLVIDATTGQNGVIQAEEFSKVADVSGIILTKMDSTSKGGIGLAIKELLNIPIKMIGVGEKVDDLLAFDIDQYIVHLSSGFMQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152771 for 2254 contacts (-67.8/contact) +
2D Compatibility (PS) -28843 + (NN) -11573 + (LL) 596
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -218091.0 ( -96.76 by residue)
QMean score : 0.554
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