Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLD----FFDDEELLPLDNVLEFLKIAIDEGVKKIRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDALKNT-LEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFME--NTHAKSLVKGLKEKEILDLIAQKYKIMGMEKPKQGSSKIYTL--ENGYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
1TV7 Chain:B ((7-280)) | ---DKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118502 for 2033 contacts (-58.3/contact) +
2D Compatibility (PS) -29146 + (NN) -19861 + (LL) 856
1D Compatibility (HY) -27200 + (ID) 5800
Total energy: -199653.0 ( -98.21 by residue)
QMean score : 0.453
|
|
|