Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLF-ENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLLILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYIHNTLRRLEHKI |
| 3OAK Chain:C ((233-263)) | ----------------------------DPFTHMSDKIDEMYDIFGDGHDYDWALEIEN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4712 for 109 contacts (-43.2/contact) +
2D Compatibility (PS) -2926 + (NN) 992 + (LL) 20960
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 11914.0 ( 109.30 by residue)
QMean score : -0.195
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