Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTIKK--GVALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
3DXB Chain:A ((15-118))
----IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
General information:
TITO was launched using:
RESULT:
Template:
3DXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73021 for 726 contacts (-100.6/contact) +
2D Compatibility (PS) -10807 + (NN) -3311 + (LL) 316
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -98173.0 ( -135.22 by residue)
QMean score : 0.748
(partial model without unconserved sides chains):
PDB file :
Tito_3DXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DXB-query.scw
PDB file :
Tito_Scwrl_3DXB.pdb
: