Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQA-AFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGE----------IAFKYDA---------------QIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDG----GASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP |
4POW Chain:A ((5-256)) | ------------------------------KSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAF--SRPYLLTPMTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDTIDNVVMDLKAGRIDASL-ASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASP- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4POW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93423 for 1728 contacts (-54.1/contact) +
2D Compatibility (PS) -24580 + (NN) -15207 + (LL) 2560
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -147650.0 ( -85.45 by residue)
QMean score : 0.484
|
|
|