Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTETDNFNKQDKHKLD---YRKINYESKEIDDGKFIRIGDEVNHI----FIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDD-----ALDIKVLDVFDDGKYTYFRY-----DRDQA------------FSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKK------------WTLRS----GKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNII-----KTPKPLQKDLKKNAKKHTIKTQYCVPIPYIE-RLKTTDGLEKHQKGLNNTKKQIQANPIE----EIKENKK- |
| 1JFA Chain:A ((1-354)) | MENFPTEYFLNTTVRLLEYIRYRDSNYTREERIENLHYAYNKAAHHFAQPRQQQLLKVDPKRLQASLQTIVGMVVYSWAKVSKECMADLSIHYTYTLVLDDSKDDPYPTMVNYFDDLQAGREQAHPWWALVNEHFPNVLRHFGPFCSLNLIRSTLDFFEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNERSLFLEITSAIAQMENWMVWVNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVAVFSDKDPQVMDTIECFMHGYVTWHLCDRRYRLSEIYEKVKEEKTEDAQKFCKFYEQAANVGAVSPSEWAYPPVAQLANV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 85499 for 2224 contacts (38.4/contact) +
2D Compatibility (PS) -30094 + (NN) -5012 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: 40943.0 ( 18.41 by residue)
QMean score : ?
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