Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MNFF--DTLMGMFVEPSQKVAKSLAEHVGSFFHAQLILNTIITILFMIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNTNLSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPKIIMFFLVILGELLFLGLLLII----VLLVTAEIFMWSALGLIVLPLG--LIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNYGIIYKVNTLIPTKHEVTQGFYGN---ADKMANEGKIIDVFGNVLKGD----WNSYIAHSSIVGFLTIIVLGSVICFFLVKRVPDFINNIFGTSGGVGAVTEMMQKIGMTIGGAVFGGSAVMVANQVKQAYQSAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVKAGVKHFVASVKSGFGFDNDKNNK |
| 4EEI Chain:A ((1-433)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALEDRMVPKGTAAEIRARAQIRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGV-TSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSF----------GQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHR-----------SDVFEVYEGFKKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMV--YALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVESFSKKLQKVMHD------EHNIILDIPEMDFEGIKKTYLKEIDHVFDRSVKAR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265224 for 3035 contacts (-87.4/contact) +
2D Compatibility (PS) -39578 + (NN) 1666 + (LL) 2268
1D Compatibility (HY) -3600 + (ID) 2350
Total energy: -306818.0 ( -101.09 by residue)
QMean score : 0.183
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