Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGIDNSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKEASAFSLLFVLQFVRPMQRE---VLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT |
3UJ7 Chain:A ((59-174)) | ---------------------------------------------------------------VLDIGSGLGGGCMYINEKYGAHTH--GIDICSNIVNMANERVSGNNKIIFEANDILTKEFPE-NNFDLIYSRDAILHLSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKLFSEKKFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79671 for 776 contacts (-102.7/contact) +
2D Compatibility (PS) -12001 + (NN) -3258 + (LL) 5072
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -97708.0 ( -125.91 by residue)
QMean score : 0.485
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