Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFL-FKEVLKELGSQTWLKWPNDLYLGDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
2DVE Chain:A ((16-131))
--------FQEITSTNEFA----KTSYLEEGTVIVADKQTMGHGRLNAKWESPEGGLWLSIVLSPKVPQKDLP---KIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRL
General information:
TITO was launched using:
RESULT:
Template:
2DVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52021 for 816 contacts (-63.8/contact) +
2D Compatibility (PS) -12838 + (NN) -12031 + (LL) 1844
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -85046.0 ( -104.22 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_2DVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DVE-query.scw
PDB file :
Tito_Scwrl_2DVE.pdb
: