Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRID-----KDYKKQVVELKGHIPFKDSFKEETLE----NFTNL---LKEHRITPSYKTDIESVKKEGELFKITTT--------------SNTTYHAKFVVVAIGKMGQPNRPTTYK--IPVALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTT-PTTLNYRKKEFSRINEDNAKNLQEVLDNNT---LKSKLGVDIESLEEDNTQIKVNFTDNTSE-----SFDRLLYAIG--GSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 1ZKQ Chain:A ((30-353)) | --QQSFDLLVIGGGSGGLACAKEAAQLG-KKVAVADYVEP-SPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATG--GRPRYPTQVKGALEYGITSDDIFWLKE--SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN--QLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPK-NQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSST |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67773 for 2137 contacts (-31.7/contact) +
2D Compatibility (PS) -29537 + (NN) 1712 + (LL) 784
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -112814.0 ( -52.79 by residue)
QMean score : 0.309
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