Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA
3KQH Chain:A ((126-166))-----------------------------------------------------------------GARLVVLATATPPGSVTVP--HP-NIEEVALSSTGEIPFYGKAIPIETIKGGRHLIFCHSKKKCDELAAKLSGLGLNAVAYYRGLDVSVIPTSGDVIVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTVPQDAVSRSQRRGRTGRGRMGIYRFVTPGERP


General information:
TITO was launched using:
RESULT:

Template: 3KQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2356 for 125 contacts (-18.8/contact) +
2D Compatibility (PS) -4392 + (NN) -268 + (LL) 4852
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -5064.0 ( -40.51 by residue)
QMean score : -0.278

(partial model without unconserved sides chains):
PDB file : Tito_3KQH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KQH-query.scw
PDB file : Tito_Scwrl_3KQH.pdb: