Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLE------GLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENKFKDMGHYAASDEVNEKQVLK--------MYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
2EFR Chain:A ((147-286)) | -----------------------------------RMKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKY-EEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15608 for 477 contacts (32.7/contact) +
2D Compatibility (PS) -13648 + (NN) -5375 + (LL) 4480
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -5685.0 ( -11.92 by residue)
QMean score : 0.440
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