Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL |
2RMY Chain:A ((1-34)) | ---------------------------------------MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLY--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -455 for 134 contacts (-3.4/contact) +
2D Compatibility (PS) -3517 + (NN) -31 + (LL) 14792
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 8889.0 ( 66.34 by residue)
QMean score : 0.020
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