Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNE-MSVLALENLRVLLS--EHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
4GTC Chain:A ((35-220))
----------------AVRAARVSFDMG--DEERDRHLIEYLMK-HGHETPFEHIVFTFHVKAPIFVARQWF-RHRIASYNELSGRYSKLSY---EFYIP----SPERLEGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPRRVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKY
General information:
TITO was launched using:
RESULT:
Template:
4GTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41316 for 1196 contacts (-34.5/contact) +
2D Compatibility (PS) -18691 + (NN) -3146 + (LL) 2052
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -75101.0 ( -62.79 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_4GTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GTC-query.scw
PDB file :
Tito_Scwrl_4GTC.pdb
: