Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAV--PAGVKLSILTVKGAANNINNDKYAGQQVFL-IVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
4Q33 Chain:A ((112-190))
-------------------------------------DAVVKAKVDVIVLDTAHGHSKGVIEGVKRIKA--------KYPELQVIAGNIATPEAVRDLAEAGADCVKVGIG------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36604 for 373 contacts (-98.1/contact) +
2D Compatibility (PS) -6210 + (NN) 1677 + (LL) 7108
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -39129.0 ( -104.90 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_4Q33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q33-query.scw
PDB file :
Tito_Scwrl_4Q33.pdb
: