Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILKEVCIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYG----VAKHVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSGLLDKPAINELLKAAAGLEVTFHMAFDELVETEKLSAIDWLVEQGVTRIL-------THGGDGAKLPEETFVQWRKYIDYA---AGRIIILPGGGIKSHNLEWIIKETGAAEIHGTDLFGER
3CTL Chain:A ((13-196))
--------LKFKEQIEFIDSHADYFHI--DIMDGHFVPNLTLSPFFVSQVKKLAT-KPLDCHLMVTRP--------------QDYIAQLARAGADFITLHPETING-----QAFRLIDEIRRHDMKVGLILNPE---TPVEAMKYYIH-KADKITVMTVDPGFAGQPF--I-PEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMA-AGADVFIVGT-----
General information:
TITO was launched using:
RESULT:
Template:
3CTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108436 for 1268 contacts (-85.5/contact) +
2D Compatibility (PS) -18345 + (NN) -6144 + (LL) 3600
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -138025.0 ( -108.85 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3CTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CTL-query.scw
PDB file :
Tito_Scwrl_3CTL.pdb
: