Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLF---VTWLQGDFMN---------------------------RLPGNLDITKVDMP-----LVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVI----------RYFYSNLIYGIQ-NMVSLTAQTLVA------------SYVFLLVLWILALIFFY-----FHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGS------YILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE----- |
| 4BE3 Chain:A ((1-312)) | TKYPSELIPQMDEWKILLGDGTHKEDLVNYAKDDFFYVEHENETDWVVFKTPNSGITSRTSSNTRTELGQKKHWIPETGGKLNATLKVQHVSTSGDARVAASYSVVVGQIHSDEGHENEPIKIFYKKFPGHTKGSVFWNYEINTKGDNSKRWDYSTAVWGYDMSVVGPTATSYPEEPEDGIALGEEFSYEINVYEGIMYLTFSSEGHKTIKFTKNLLKSNFTKKSDIPQQIKTLYASIGRDGIERENAYAGEIQYFKLGAYNQTNGKSPEDNLVWSTGAD-----VYDGDIAKQYANGSYAEVWFKEATLGSGSAPE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -261105 for 1771 contacts (-147.4/contact) +
2D Compatibility (PS) -24165 + (NN) 13033 + (LL) 408
1D Compatibility (HY) 1200 + (ID) 2100
Total energy: -272729.0 ( -154.00 by residue)
QMean score : 0.049
|
|
|