Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISIL-DAVASDPIFVALGYLHLVQNEANIMAQFASADAEQAERIFERLNKRKQTESRRSNDK
1AQT Chain:? ((2-86))
STYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1AQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68575 for 571 contacts (-120.1/contact) +
2D Compatibility (PS) -8710 + (NN) 1578 + (LL) 1908
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -81149.0 ( -142.12 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1AQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AQT-query.scw
PDB file :
Tito_Scwrl_1AQT.pdb
: