Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTSEFFSTLLLIIGLL-------IGFFLAILL-----ILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSF---FTVIGATLLV------------SLITVQITAIPFQYTVLIFWSSWLF----------HLLSFWKKI---------RVPKKMKNEMIQLAGFLLITALYFVGYFAMK-----SLHFSIIHVADFPG--VIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK------------------------------------- |
| 4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTD---RVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRADPWDPGSVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187976 for 1384 contacts (-135.8/contact) +
2D Compatibility (PS) -18454 + (NN) -5748 + (LL) 100
1D Compatibility (HY) 400 + (ID) 1650
Total energy: -213328.0 ( -154.14 by residue)
QMean score : 0.210
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