Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAV-----APDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAE-----------KGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
2KHV Chain:A ((1-106)) | ---------------------------------------------------MTFSECAALYIKAHRSSWKNTKHADQWTNTIKTYCGPVIGPLSVQDVDTKLIMKVLDPIWEQKPETASRLRGRIESVLDWATVRGYREGDNPARWRGYLEHHHHHH------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57512 for 553 contacts (-104.0/contact) +
2D Compatibility (PS) -9783 + (NN) -2056 + (LL) 13900
1D Compatibility (HY) 2800 + (ID) 500
Total energy: -53151.0 ( -96.11 by residue)
QMean score : 0.145
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