Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKSLSFMRVLEAVRTMLQEKG-GLDISIVMRD---QVEMPTTMIEMID--QEEEESQTAWKEKYRFAIHHYTNETD---L-A-GVE-KIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVSICRELKVKI
3FZ2 Chain:A ((7-133))
------TELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGE----SDTWQAELHIEVFLPAQVPASELDAWMESRIYPVMSDIPAL-SD-LITSMVASGYDYRRDDDAGLWSSADLTYVITYE-----
General information:
TITO was launched using:
RESULT:
Template:
3FZ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43278 for 763 contacts (-56.7/contact) +
2D Compatibility (PS) -11727 + (NN) 1524 + (LL) 1408
1D Compatibility (HY) -400 + (ID) 650
Total energy: -53123.0 ( -69.62 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3FZ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FZ2-query.scw
PDB file :
Tito_Scwrl_3FZ2.pdb
: