Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKTKQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGAILFADNKKLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVT---YTSPNEAIYGKRMANAKSDDKI-------TNNDDLLIFAKKQILDVPETALTISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 2GGS Chain:A ((1-273)) | MRTLITGASGQLGIELSRLL----------SERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKK---------------RPDVIINAAAMTDVDKCEIE-----------------------------------KEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNY--------------------KEEDIPNPINYYGLSKLLGETFALQDDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRKTGIIHVAGER---ISRFELALKIKEKFNLPGEVKEVDEVRGWI------------------------AKRPYDSSLDSSRARKILSTDFYTLDLDGMVV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23695 for 2232 contacts (-10.6/contact) +
2D Compatibility (PS) -27624 + (NN) -2213 + (LL) 7244
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -52788.0 ( -23.65 by residue)
QMean score : 0.168
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