Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIWIDAGHGGKDSGASG-NGLVEKNWVLTVAKQLQTELVKAG-FEVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGG---GKGYEDYIYTSVPAATVEIQKIIH--------------------------------------KNIITKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGFCDST-DALILEKKAYQTDYCLGIVSAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKTLNLTTTKGVPGSWVLKTEVNTGKR |
| 3NE8 Chain:A ((5-229)) | -FRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEA--SDAIAKSLAESENKVDLLDGLPKEDILLDLTRRETHAFSINFANNVVSNLSK--SHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQK-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62883 for 1442 contacts (-43.6/contact) +
2D Compatibility (PS) -18917 + (NN) -7664 + (LL) 3980
1D Compatibility (HY) -9600 + (ID) 2600
Total energy: -97684.0 ( -67.74 by residue)
QMean score : 0.343
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