Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAET---AIKQINQLG-GRFSISINI-PAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV |
| 3GFY Chain:A ((182-394)) | ---------------------QAIVEPAKKRVSSFEALIRSPTGGS---PVEMFAAI----AAEDRYRFDLESKAYAFALAGQLPLGKHQLAINLLPGSLYHHPDAVGWLMDSLLAAGLRPDQVLIE----------DQFRKVLKALRVAGMKLAID-----------LTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75683 for 1363 contacts (-55.5/contact) +
2D Compatibility (PS) -19729 + (NN) -7331 + (LL) 5444
1D Compatibility (HY) -14400 + (ID) 2800
Total energy: -114499.0 ( -84.01 by residue)
QMean score : 0.405
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