Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYR--YVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIFQLDYPV-----IMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
1KC6 Chain:A ((1-257)) | ---SFIKPIYQDINSILIGQKVK----RPAAGEPFEKLVYKFLKEN-----LSDLTFKQYEYLNDLFMKNPAIIGHEARYKLFNSPTLLFLLSR--------GKAATENW-----------SIENLFEEKQND-----------------TADILLVKDQFYELLDVKTRNISK--SAQAPNIISAYKLA-QTCAKMIDNKEFDLFDINYLEVDWELNG---------------------EDLVCVSTSFAELFKSE-PSELYINWAAAMQIQFH-VRDLDQGFNGTREEWAKSYLKHFVTQAEQRAISMIDKFVKPFKKYIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152148 for 1733 contacts (-87.8/contact) +
2D Compatibility (PS) -24648 + (NN) 6899 + (LL) 6892
1D Compatibility (HY) -10800 + (ID) 2100
Total energy: -175905.0 ( -101.50 by residue)
QMean score : 0.207
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