Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLDFSKKTMQDFERDAEVVHATRER----SFWRFMLADRRAVFATSVLILITVACIFAFLSPYDPNALSVQDKLMPPNSSHWFGTDDHGRDYLTRVLYGGRVSLLVGVFAMMIAVVVGTLAGTVSGYFGGFIDNIVMRFLDIFMSIPSFFLLMILNAYLKPGISNIIIIIGLLSWMEVARIVRAETLTLKEREFILYSKSSGGGFFHIMFKHIIPNAMPSIVVAASLNVATAILTESALSFLGLGVQQPNASWGSMLNNAQGYVGEATYLALFPGLLILMTILSFNVLGDVLRKGLSRRY |
| 1BY0 Chain:A ((1-27)) | ------RKKLEELERDLRKLKKKIKKLEEDNPW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5218 for 80 contacts (65.2/contact) +
2D Compatibility (PS) -2423 + (NN) -464 + (LL) 21544
1D Compatibility (HY) -800 + (ID) 250
Total energy: 22825.0 ( 285.31 by residue)
QMean score : 0.292
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