Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHFTGFENYKRLFNDPEFWKSFRN----TITF--IIGYLPSVMILGLACALMLNQKIKLRPFFRAVYFLP-VITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGG--------PSGATMTLVQNIYNHAFRYF---EMGYASAMSWILFIVIFIITIIQNKLQKRWSNY |
| 4JBW Chain:H ((259-509)) | ---------------------------------------------------TGWKNFTRVF----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWEALRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKAT------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179652 for 1582 contacts (-113.6/contact) +
2D Compatibility (PS) -23405 + (NN) -5247 + (LL) 4716
1D Compatibility (HY) -24800 + (ID) 3900
Total energy: -232288.0 ( -146.83 by residue)
QMean score : 0.330
|
|
|