Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQE--VKVTVTALPD-KTYTGKVKEIAE---QGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 1D2A Chain:A ((65-153)) | -----------------------------------------CKQHGVKINHKGK------QIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSK----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 775 for 457 contacts (1.7/contact) +
2D Compatibility (PS) -8462 + (NN) -169 + (LL) 10104
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -3202.0 ( -7.01 by residue)
QMean score : 0.249
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