Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
2PLX Chain:B ((1-26))
---------------------------QCKVMCYAQRHSSPELLRRCLDNCEK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3296 for 121 contacts (27.2/contact) +
2D Compatibility (PS) -2619 + (NN) 139 + (LL) 7676
1D Compatibility (HY) -800 + (ID) 350
Total energy: 7342.0 ( 60.68 by residue)
QMean score : -0.065
(partial model without unconserved sides chains):
PDB file :
Tito_2PLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PLX-query.scw
PDB file :
Tito_Scwrl_2PLX.pdb
: