Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDK-AIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGY-KEVSK |
2G5H Chain:A ((268-357)) | -----------------------------------------------------------------LGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24358 for 416 contacts (58.6/contact) +
2D Compatibility (PS) -9535 + (NN) -3778 + (LL) 5168
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 10863.0 ( 26.11 by residue)
QMean score : 0.290
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