Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRI--ADILTTGFL-DGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDAIQVEMY----E--GDF----EDTPEVDSKLVKLAKVMGGIVVTND-YNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
| 1V96 Chain:A ((3-144)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------LPPDITFDSLALIKMHSQNMKRILEVTLAKFTVNLSIVTVYRYLTAR--LKKNI---EAEFEILKDIYNIVPL-LDDIAIKAAQIEANLIKKEITLDMEDIITATTAIYTNSLLVTDDPKRYEP-IRRFGLDTMPLDKFIKEVELMV---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50376 for 920 contacts (-54.8/contact) +
2D Compatibility (PS) -13459 + (NN) -5069 + (LL) 18252
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -53652.0 ( -58.32 by residue)
QMean score : 0.463
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