Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWL----------EFENNVRDLYPLQYTDVEKYETPIFYESKNDNP---------NFDTLNDNATGLDGAL----DTLEKAKETKAKTSEVLDKAVDNYSK--------YVTEQVDEFVAQTEIFTNAVKSGDIEKAKAAYVSPRLNYERIEPIAESFG-----DLDPKIDARINDVEN--------------------------EADWTGFHVIERALWEKKSLEGMDVYADKLLTDAKALQAEVKNLKLEPKPMVAGAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAIIPALNAQDKKLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIRDISDQLSHLSELMAQTGKIF |
| 3OYV Chain:A ((125-356)) | ----------------------------------------------------------------------YTNNIYSIRNAYYGSLDGNINANSLSTVIAGANSSLDTKIKNAIQKAAKAIQDIPQPFRNHIPSNETVAAMDACAELESILKNDLKSYIANNSNNINTDAVLNPVVTQYVDAVVVPTYKSLKEKNDALYNAVIVLADNPSNSAFETACDAWITAREPWEKSEAF--LFGPVDEMGLDPNMDSWPLDQNAIVQILNSQSWSDLEWSEGDDEAAVESAQNVRGFHTLEFLLYKNGE------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18170 for 1068 contacts (17.0/contact) +
2D Compatibility (PS) -17495 + (NN) -3472 + (LL) 16328
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: 6481.0 ( 6.07 by residue)
QMean score : 0.304
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