Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LRKLDFSYNNANYNAEFLMKILTTLKDITKVEQFTIEIIDAVPNDQEQFKEEKGLFSKEVFDFNNLVKESHGIKIDFKEITNILKQCRTVWELSMLVVTSENELNDSGKVLCEVELIEGDLFAILYSEDFNIDLFLEKFSTDEITIEG |
3VOB Chain:A ((162-243)) | -----------------------------------LDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSAL-MGIGVSSGENRAVEAAKKAISSPLLE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1037 for 383 contacts (2.7/contact) +
2D Compatibility (PS) -8486 + (NN) -1192 + (LL) 5136
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -9605.0 ( -25.08 by residue)
QMean score : 0.198
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