Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAF----EVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICI--QAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF |
2D5C Chain:A ((4-244)) | ---------------FAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRAFRGVNL-----TLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAGGAGRAVAFALREAGL----EVWVWNRTPQ---RALALAEEFGLRA------VPLEKAREAR-------LLVNATRVGLEDPSASPL--PAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWT-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135562 for 2053 contacts (-66.0/contact) +
2D Compatibility (PS) -25029 + (NN) -5359 + (LL) 4412
1D Compatibility (HY) -14000 + (ID) 4200
Total energy: -179738.0 ( -87.55 by residue)
QMean score : 0.559
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