Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGATYLHIVDLDGALEGRPINLEVIQKMKITAKIPVQVGGGIRSMAQVDYYLESGIDRVIIGSAALTDPDFLRAAVQKYGAKIAAGIDAKNGFVATRGWLDVSQVSYLDLAKRMEKVGVETIIYTDISRDGTLTGPNLEQMANLKEHVKVNLIASGGVSSRADLEALAQLG------LYGAIAGKALYNHHISMSDIVEVEQIAY
2W79 Chain:A ((1-226))
MLVVPAIDLFRGKVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLSEFAEY-IQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSSLKS-LREIDVEPVFSLVTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKVGTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAF------------------
General information:
TITO was launched using:
RESULT:
Template:
2W79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138511 for 1818 contacts (-76.2/contact) +
2D Compatibility (PS) -24744 + (NN) -16760 + (LL) 1740
1D Compatibility (HY) -16800 + (ID) 3400
Total energy: -198475.0 ( -109.17 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2W79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W79-query.scw
PDB file :
Tito_Scwrl_2W79.pdb
: