Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAY-GKQKVTIYLTKDTKLADLEVKSHSGDIDVA-DFK-VKKFVSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
4O3Y Chain:A ((353-511)) | ------------------------------------------------------------------------------------------------------------------YMKFGQLWQKEGEQ------TKDNSLFLQGERTATDKIPVGGNYKYVGTWDALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGFTGTANTTDTG-----FALDS--SQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSV------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30612 for 1070 contacts (28.6/contact) +
2D Compatibility (PS) -15635 + (NN) 2174 + (LL) 11936
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: 24087.0 ( 22.51 by residue)
QMean score : 0.098
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