Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
2O5G Chain:B ((4-19))
ARRKWQKTGHAVRAIGRLS-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4352 for 55 contacts (-79.1/contact) +
2D Compatibility (PS) -1622 + (NN) 1128 + (LL) 7088
1D Compatibility (HY) 1600 + (ID) 150
Total energy: 3692.0 ( 67.13 by residue)
QMean score : 0.182
(partial model without unconserved sides chains):
PDB file :
Tito_2O5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5G-query.scw
PDB file :
Tito_Scwrl_2O5G.pdb
: