Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIELTKYDLTYFINTNQVNWFLVSEGIH
2YH0 Chain:A ((153-171))
--------------------VGNIP-FGITEEAMMDFFNA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2485 for 67 contacts (-37.1/contact) +
2D Compatibility (PS) -2026 + (NN) -1073 + (LL) 3960
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -4224.0 ( -63.04 by residue)
QMean score : 0.831
(partial model without unconserved sides chains):
PDB file :
Tito_2YH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YH0-query.scw
PDB file :
Tito_Scwrl_2YH0.pdb
: