Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNWQQKWESWRDMTAAMQQEIKIEAAEKVTSYIKNDQFEEAINVIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLSHVKSEAINQFTKRDFNLVDSNDT-HMQ-FLKGNRNFYMDIFNPEESEEYHYANLDEKCQYKNI------GFICQND-------AAAEIATKLTNEWLET-LEAPKKKFLTVNIANLNAMKQNPEVLFQ
2VDJ Chain:A ((207-296))-------------------------------------------------------------------------------------------------------------------ELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRD-KGLNIDVPKNYFKHDNPNEKPLVRWRSHGNLLFSNWLNYYVYQE------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7276 for 346 contacts (-21.0/contact) +
2D Compatibility (PS) -7955 + (NN) -5572 + (LL) 12092
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -13061.0 ( -37.75 by residue)
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_2VDJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VDJ-query.scw
PDB file : Tito_Scwrl_2VDJ.pdb: