Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKNLFKK--PKMKDEMLEMKQNQYG------ARAFNMMIIIVAIVILI----------KAVVLEASISELWVELLLLIVG-GGYYFYSVLKNNVPFMPTISLKQTIRLV-FLISAIFGISVGIRNVFFLYADNMSGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNIMKKIEVENAED-----------
2W69 Chain:A ((7-203))
AMEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEVCFMYSDFHFINEQGESIVVELDDPNALKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKST-------HIHIFSFTGEEMATKA-DYTLDEESRARIKTRLFTIRQEMANRGLWDSFRQSER
General information:
TITO was launched using:
RESULT:
Template:
2W69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136965 for 1110 contacts (-123.4/contact) +
2D Compatibility (PS) -16787 + (NN) 338 + (LL) 1276
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -157988.0 ( -142.33 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2W69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W69-query.scw
PDB file :
Tito_Scwrl_2W69.pdb
: