Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKIVSEYPFIPGIDASGVVVNS-KSDQFQVGDEVIVTSYDFGVSYFGGYSEFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPNAGKIAVSGATGGVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREAFQPEKVRALDKQLYAGA-----IDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCPMSKRERIWN---RLATDY---KLTNLESLATE---------IAFSELPESLHQVMNGGVTGRYLVKVK |
| 4EYE Chain:A ((22-340)) | MKAIQA---QSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSGIKPGDRVMA------FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYF---AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVR----EATGGAGVDMVVDPIG--AFDDAVRTLASEGRLLVV----------KVNRLLLRNASLIGV------------AWGEFLRTHADYLYETQAGLEKLVAEGMRPPVSARIPLSEGRQALQDFADGKVYGKMVL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148439 for 2422 contacts (-61.3/contact) +
2D Compatibility (PS) -30954 + (NN) -12602 + (LL) 1872
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -207673.0 ( -85.74 by residue)
QMean score : 0.465
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