Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLV---RICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
4AIK Chain:A ((8-137))
------DLARLVRVWRALIDHRLKPLELTQTHWVTLYNINRLPPEQSQIQ--LAKAIGIEQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPIIEQVDGVISSTRKEILGGISSDEIAVLSGLIDKLEKNI---------------
General information:
TITO was launched using:
RESULT:
Template:
4AIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35705 for 731 contacts (-48.8/contact) +
2D Compatibility (PS) -13538 + (NN) -2855 + (LL) 1556
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -59242.0 ( -81.04 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_4AIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AIK-query.scw
PDB file :
Tito_Scwrl_4AIK.pdb
: