Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNKFMELLGEKLMPLAAKLGENRYLTTLRDAFMLAFPLTMFGSIAVVLMNLPFWSDETKAVLQLYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGAVALASFLILTPFFFNSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDWTIKMPAGVPPAVAKSFAALIPAILTLSIFLAINVMVQFFFHTNLHDVVYTVIQKPLVGLGSGIVPTLIALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHIITKPFMEVFTVGMGGSGMTLAVVIALAFLMKSKQSKEIGRLALGPGIFNVNEPVLFGMPIVLNATILIPWIIAPLIVTTLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLGGALQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK |
| 1ZXA Chain:A ((9-44)) | -AKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -932 for 135 contacts (-6.9/contact) +
2D Compatibility (PS) -4132 + (NN) -4220 + (LL) 32964
1D Compatibility (HY) -400 + (ID) 300
Total energy: 22980.0 ( 170.22 by residue)
QMean score : 0.090
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