Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG
1E2B Chain:A ((3-100))
KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLP--NKPVEVIDSLLYGKVDGLGVLKAAVAAI-
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81978 for 815 contacts (-100.6/contact) +
2D Compatibility (PS) -10818 + (NN) -7969 + (LL) -184
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -108649.0 ( -133.31 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: