Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK
3QE7 Chain:A ((391-410))
--------------------------------------------------------------------GMALATIVGIGL-SLIFKLIS---------------
General information:
TITO was launched using:
RESULT:
Template:
3QE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7480 for 70 contacts (-106.9/contact) +
2D Compatibility (PS) -2004 + (NN) -912 + (LL) 8412
1D Compatibility (HY) -400 + (ID) 50
Total energy: -2434.0 ( -34.77 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3QE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QE7-query.scw
PDB file :
Tito_Scwrl_3QE7.pdb
: