Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELKHVIPNMEKTFGQLEFAGEGKVEQRRINGKPTILSRSYNLYSNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITA--EGYKIGTRGFTNYVMYADDIVKV
1D0Z Chain:A ((666-700))
------------------------------------------------------------------KLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD-----
General information:
TITO was launched using:
RESULT:
Template:
1D0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1990 for 110 contacts (18.1/contact) +
2D Compatibility (PS) -3184 + (NN) 1254 + (LL) 5184
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 1344.0 ( 12.22 by residue)
QMean score : -0.088
(partial model without unconserved sides chains):
PDB file :
Tito_1D0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D0Z-query.scw
PDB file :
Tito_Scwrl_1D0Z.pdb
: