Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIMVYESGVSEMTENEQNKHEEKALVPSFGLDLLRDYLIPELLGDEAPHIMYWAGKDLARKFPLDSL---------EEVAE-----FFEEASWGN-FSILKE-KKDEMRLLLEG-ETVAARFR--T---QEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDNEERY |
2C0J Chain:B ((36-159)) | --------------------------------------------------VLEGMGFRVGQALGERLPRETLAFREELDVLKFLCKDLWVAV-FQKQMDSLRTNHQGTYVLQDNSFPLLL----GLQYLEEAPKFLAFTCGLLRGALYT-LGIESVVTASVAAL-PVCKFQVVIPKS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35265 for 773 contacts (45.6/contact) +
2D Compatibility (PS) -10757 + (NN) -5158 + (LL) 4752
1D Compatibility (HY) -5600 + (ID) 350
Total energy: 18152.0 ( 23.48 by residue)
QMean score : 0.374
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