Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASGRGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDEAKYLVRPANFPDDTTPGTGMVFVKSNQHEIAVINMQGRTFLADLDDPFRKMDYLIEEAKKRTNIIFVDFHAETTSEKEAMGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD
4B2O Chain:B ((1-262))
MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEKIYHSLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGT-PGKGITYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDFHAEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTGPYDGILGMDRETIIKRFKTNLPVRFTVAE-GKTTLSGVVIDIDDQTKKAVKIERILINDDHMF---
General information:
TITO was launched using:
RESULT:
Template:
4B2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163742 for 2335 contacts (-70.1/contact) +
2D Compatibility (PS) -28877 + (NN) -19123 + (LL) 132
1D Compatibility (HY) -28000 + (ID) 8700
Total energy: -248310.0 ( -106.34 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_4B2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B2O-query.scw
PDB file :
Tito_Scwrl_4B2O.pdb
: