Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEK-----GYKHTDKREFLINLLARKNKYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERNFRLAC----THEHHHHHFICMKCGKTKEIMMCPMDFLTEALP---GYQIDGHKFEVYGECPECLQAS
4MTE Chain:A ((4-148))
---TTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVEST---NSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVE--
General information:
TITO was launched using:
RESULT:
Template:
4MTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46233 for 871 contacts (-53.1/contact) +
2D Compatibility (PS) -14435 + (NN) -3090 + (LL) 360
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -72698.0 ( -83.46 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_4MTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTE-query.scw
PDB file :
Tito_Scwrl_4MTE.pdb
: