Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVLYFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE
2JS3 Chain:A ((1-96))
MGSSHHHHHHSSGRENLYFQGMTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHAD---DCPVVIAKQILSSRPKLHAV-
General information:
TITO was launched using:
RESULT:
Template:
2JS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25429 for 500 contacts (50.9/contact) +
2D Compatibility (PS) -9834 + (NN) -200 + (LL) 452
1D Compatibility (HY) -1200 + (ID) 600
Total energy: 14047.0 ( 28.09 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_2JS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JS3-query.scw
PDB file :
Tito_Scwrl_2JS3.pdb
: